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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12078106 chr1:35729164 T/C KRTAP13-1 chr21:31768392-31769140:+ 0.21 6.95 1.63E-11 Box Plot
BLCA rs12082767 chr1:35804395 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.93E-10 Box Plot
BLCA rs12088662 chr1:35743722 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.2 6.79 4.17E-11 Box Plot
BLCA rs12089267 chr1:35743006 A/G KRTAP13-1 chr21:31768392-31769140:+ 0.2 6.79 4.17E-11 Box Plot
BLCA rs12089579 chr1:35822983 G/A KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.76E-10 Box Plot
BLCA rs12102478 chr16:26372107 T/C C14orf138 chr14:50575350-50583297:- 0.38 6.22 1.29E-9 Box Plot
BLCA rs12102697 chr16:26369930 C/T C14orf138 chr14:50575350-50583297:- 0.37 6.14 2.11E-9 Box Plot
BLCA rs12105072 chr2:234180535 A/G CAB39 chr2:231577560-231685790:+ 0.67 7.82 5.16E-14 Box Plot
BLCA rs12105072 chr2:234180535 A/G DIS3L2 chr2:232825955-233209060:+ 0.63 5.97 5.37E-9 Box Plot
BLCA rs12105072 chr2:234180535 A/G DNPEP chr2:220238268-220264744:- 0.63 6.36 5.91E-10 Box Plot
BLCA rs12105072 chr2:234180535 A/G NCL chr2:232318242-232348352:- 0.55 7.06 7.82E-12 Box Plot
BLCA rs12105072 chr2:234180535 A/G RNF25 chr2:219528587-219537134:- 0.57 6.16 1.84E-9 Box Plot
BLCA rs12105072 chr2:234180535 A/G THAP4 chr2:242523820-242576864:- 0.56 6.17 1.74E-9 Box Plot
BLCA rs12105072 chr2:234180535 A/G UBE2F chr2:238875469-238951423:+ 0.51 5.99 4.84E-9 Box Plot
BLCA rs12110974 chr6:46290441 C/G RPL7L1 chr6:42847356-42857663:+ -0.66 -6.07 3.08E-9 Box Plot